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Genomic, Evolutionary and Phenotypic Insights into Pseudomonas Phage Adele, a Novel Pakpunavirus with Potential for Phage Therapy

Title: Genomic, Evolutionary and Phenotypic Insights into Pseudomonas Phage Adele, a Novel Pakpunavirus with Potential for Phage Therapy
Authors: Andrei V. Chaplin; George A. Skvortsov; Nina N. Sykilinda; Konstantin S. Troshin; Anna A. Vasilyeva; Artem A. Malkov; Maria R. Leont’eva; Konstantin A. Miroshnikov; Mikhail A. Yaitsky; Dmitriy A. Shagin; Boris A. Efimov; Lyudmila I. Kafarskaia; Sergei K. Komarevtsev; Peter V. Evseev
Source: Viruses ; Volume 18 ; Issue 1 ; Pages: 42
Publisher Information: Multidisciplinary Digital Publishing Institute
Publication Year: 2025
Collection: MDPI Open Access Publishing
Subject Terms: phage; phage evolution; Pakpunavirus; Pseudomonas aeruginosa; Pseudomonas phages; phage genomics; phage therapy; antimicrobial resistance
Description: Bacteriophages are powerful drivers of microbial evolution and are increasingly explored as alternatives to antibiotics against multidrug-resistant pathogens such as Pseudomonas aeruginosa. Here, we describe the isolation, phenotypic characterization and genomic, structural and evolutionary analysis of Pseudomonas phage Adele, a lytic myovirus representing a novel species within the genus Pakpunavirus (family Vandenendeviridae). Phage Adele exhibits a short latent period of 20 min, a burst size of 59 ± 11 virions per infected cell and a high virulence index, efficiently lysing non-O11 Pseudomonas aeruginosa strains and reducing biofilm biomass. In vivo, Adele confers marked protection in a Galleria mellonella infection model. Phylogenetic reconstruction, synteny analysis and structural modeling demonstrate the relatedness of Vandenendeviridae to phages of the Andersonviridae and Vequintavirinae clades, pointing to a stable, ancestral virion architecture that has undergone lineage-specific elaborations, including the duplication and divergence of tail tube proteins. The tail assembly chaperone gene employs a conserved −1 programmed ribosomal frameshift. Phage Adele encodes an elaborate set of metabolic reprogramming and anti-defense systems, reflecting extensive horizontal gene transfer. The combination of a conserved structural architecture and mosaic genome establishes Adele as an exemplary system for studying modular evolution in phages, alongside its demonstrated therapeutic efficacy.
Document Type: text
File Description: application/pdf
Language: English
Relation: Bacterial Viruses; https://dx.doi.org/10.3390/v18010042
DOI: 10.3390/v18010042
Availability: https://doi.org/10.3390/v18010042
Rights: https://creativecommons.org/licenses/by/4.0/
Accession Number: edsbas.1697C2EE
Database: BASE