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Whole-exome sequencing in Russian children with non-type 1 diabetes mellitus reveals a wide spectrum of genetic variants in MODY-related and unrelated genes

Title: Whole-exome sequencing in Russian children with non-type 1 diabetes mellitus reveals a wide spectrum of genetic variants in MODY-related and unrelated genes
Authors: Glotov, OS; Serebryakova, EA; Turkunova, ME; Efimova, OA; Glotov, AS; Barbitoff, YA; Nasykhova, YA; Predeus, AV; Polev, DE; Fedyakov, MA; Polyakova, IV; Ivashchenko, TE; Shved, NY; Shabanova, ES; Tiselko, AV; Romanova, OV; Sarana, AM; Pendina, AA; Scherbak, SG; Musina, EV; Petrovskaia-Kaminskaia, AV; Lonishin, LR; Ditkovskaya, LV; Zhelenina, L; Tyrtova, LV; Berseneva, OS; Skitchenko, RK; Suspitsin, EN; Bashnina, EB; Baranov, VS
Publisher Information: Spandidos Publications
Publication Year: 2019
Collection: The University of Liverpool Repository
Description: The present study reports on the frequency and the spectrum of genetic variants causative of monogenic diabetes in Russian children with non-type 1 diabetes mellitus. The present study included 60 unrelated Russian children with non-type 1 diabetes mellitus diagnosed before the age of 18 years. Genetic variants were screened using whole-exome sequencing (WES) in a panel of 35 genes causative of maturity onset diabetes of the young (MOD Y) and transient or permanent neonatal diabetes. Verification of the WES results was performed using PCR- direct sequencing. A total of 38 genetic variants were identified in 33 out of 60 patients (55%). The majority of patients (27/33, 81.8%) had variants in MOD Y-related genes: GCK (n=19), HNF1A (n=2), PAX4 (n=1), ABCC8 (n=1), KCNJ11 (n=1), GCK+HNF1A (n=1), GCK+BLK (n=1) and GCK+BLK+WFS1 (n=1). A total of 6 patients (6/33, 18.2%) had variants in MOD Y-unrelated genes: GATA6 (n=1), WFS1 (n=3), EIF2AK3 (n=1) and SLC19A2 (n=1). A total of 15 out of 38 variants were novel, including GCK, HNF1A, BLK, WFS1, EIF2AK3 and SLC19A2. To summarize, the present study demonstrates a high frequency and a wide spectrum of genetic variants causative of monogenic diabetes in Russian children with non-type 1 diabetes mellitus. The spectrum includes previously known and novel variants in MOD Y-related and unrelated genes, with multiple variants in a number of patients. The prevalence of GCK variants indicates that diagnostics of monogenic diabetes in Russian children may begin with testing for MOD Y2. However, the remaining variants are present at low frequencies in 9 different genes, altogether amounting to ~50% of the cases and highlighting the efficiency of using WES in non-GCK-MOD Y cases.
Document Type: article in journal/newspaper
Language: English
ISSN: 1791-2997
Relation: Collapse authors list. Glotov, OS, Serebryakova, EA, Turkunova, ME, Efimova, OA, Glotov, AS, Barbitoff, YA, Nasykhova, YA, Predeus, AV orcid:0000-0002-2750-1599 , Polev, DE, Fedyakov, MA et al (show 20 more authors) , Polyakova, IV, Ivashchenko, TE, Shved, NY, Shabanova, ES, Tiselko, AV, Romanova, OV, Sarana, AM, Pendina, AA, Scherbak, SG, Musina, EV, Petrovskaia-Kaminskaia, AV, Lonishin, LR, Ditkovskaya, LV, Zhelenina, L, Tyrtova, LV, Berseneva, OS, Skitchenko, RK, Suspitsin, EN, Bashnina, EB and Baranov, VS (2019) Whole-exome sequencing in Russian children with non-type 1 diabetes mellitus reveals a wide spectrum of genetic variants in MODY-related and unrelated genes Molecular Medicine Reports, 20 (6). pp. 4905-4914. ISSN 1791-2997, 1791-3004
DOI: 10.3892/mmr.2019.10751
Availability: https://livrepository.liverpool.ac.uk/3063026/; https://doi.org/10.3892/mmr.2019.10751
Accession Number: edsbas.1B182D82
Database: BASE