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Novel insights from a multiomics dissection of the Hayflick limit

Title: Novel insights from a multiomics dissection of the Hayflick limit
Authors: Chan, Michelle; Yuan, Han; Soifer, Ilya; Maile, Tobias M; Wang, Rebecca Y; Ireland, Andrea; O'Brien, Jonathon J; Goudeau, Jérôme; Chan, Leanne JG; Vijay, Twaritha; Freund, Adam; Kenyon, Cynthia; Bennett, Bryson D; McAllister, Fiona E; Kelley, David R; Roy, Margaret; Cohen, Robert L; Levinson, Arthur D; Botstein, David; Hendrickson, David G
Source: eLife ; volume 11 ; ISSN 2050-084X
Publisher Information: eLife Sciences Publications, Ltd
Publication Year: 2022
Collection: eLife (E-Journal - via CrossRef)
Description: The process wherein dividing cells exhaust proliferative capacity and enter into replicative senescence has become a prominent model for cellular aging in vitro. Despite decades of study, this cellular state is not fully understood in culture and even much less so during aging. Here, we revisit Leonard Hayflick’s original observation of replicative senescence in WI-38 human lung fibroblasts equipped with a battery of modern techniques including RNA-seq, single-cell RNA-seq, proteomics, metabolomics, and ATAC-seq. We find evidence that the transition to a senescent state manifests early, increases gradually, and corresponds to a concomitant global increase in DNA accessibility in nucleolar and lamin associated domains. Furthermore, we demonstrate that senescent WI-38 cells acquire a striking resemblance to myofibroblasts in a process similar to the epithelial to mesenchymal transition (EMT) that is regulated by t YAP1/TEAD1 and TGF-β2. Lastly, we show that verteporfin inhibition of YAP1/TEAD1 activity in aged WI-38 cells robustly attenuates this gene expression program.
Document Type: article in journal/newspaper
Language: English
DOI: 10.7554/elife.70283
Availability: https://doi.org/10.7554/elife.70283; https://cdn.elifesciences.org/articles/70283/elife-70283-v3.pdf; https://cdn.elifesciences.org/articles/70283/elife-70283-v3.xml; https://elifesciences.org/articles/70283
Rights: http://creativecommons.org/licenses/by/4.0/ ; http://creativecommons.org/licenses/by/4.0/ ; http://creativecommons.org/licenses/by/4.0/
Accession Number: edsbas.20DADA62
Database: BASE