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Crystal structure of HERV-K envelope glycoprotein surface subunit.

Title: Crystal structure of HERV-K envelope glycoprotein surface subunit.
Authors: Nikolopoulos, Nikos; Modis, Yorgo
Publisher Information: American Society for Microbiology; Department of Medicine; //doi.org/10.1128/jvi.00195-26
Publication Year: 2026
Collection: Apollo - University of Cambridge Repository
Subject Terms: N-linked glycosylation; X-ray crystallography; betaretrovirus; endogenous retrovirus; envelope glycoprotein; ligand binding site; receptor-binding protein; Endogenous Retroviruses; Crystallography; X-Ray; Models; Molecular; Viral Envelope Proteins; Humans; Protein Conformation; Gene Products; env
Description: The most recently acquired and transcriptionally active family of human endogenous retroviruses (HERVs) is HERV-K. Of the approximately 100 copies of HERV-K in our genome, many retain the potential to proliferate by retrotransposition, express viral proteins, and form functional virus particles. Aberrant expression of the HERV-K envelope glycoprotein (Env) has been associated with cancer and neurodegeneration. Autoantibodies against HERV-K Env have been found in patients with various autoimmune diseases. Here, we report the crystal structure of the Env surface subunit (SU) from HERV-K HML-2, determined at 2.25-Å resolution. The overall fold is somewhat similar to Syncytin-2 SU and distantly related to HIV-1 gp120. The structure contains five disulfides, four N-linked glycans, and two sulfate ions bound to a basic surface groove. Two extended loops form a surface for potential interactions with cell-surface receptors or other cellular factors. The structure also contains three steroid molecules bound to hydrophobic surface patches. This crystal structure provides a platform for future studies to map autoantigenic epitopes, identify small molecules that interfere with HERV-K activity, and extend our mechanistic understanding of retroviruses.IMPORTANCEEight percent to 15% of the human genome consists of endogenous retroviruses and other virus-derived elements inherited from ancestral viral infections. Many endogenous retroviruses from the HERV-K family retain the ability to proliferate across the genome and produce virus-like particles. Aberrant expression of the HERV-K envelope glycoprotein is associated with cancer, neurodegeneration, and autoimmune disease. Here, we report the crystal structure of the HERV-K envelope glycoprotein surface subunit. The structure provides an atomic-level view of the molecular components in HERV-K most likely to trigger autoimmune responses and identifies potential binding sites for drug-like molecules and cell-surface polysaccharides.
Document Type: article in journal/newspaper
File Description: application/pdf
Language: English
Relation: https://www.repository.cam.ac.uk/handle/1810/401330; https://doi.org/10.17863/CAM.129202
DOI: 10.17863/CAM.129202
Availability: https://www.repository.cam.ac.uk/handle/1810/401330; https://doi.org/10.17863/CAM.129202
Rights: Attribution 4.0 International ; https://creativecommons.org/licenses/by/4.0/
Accession Number: edsbas.57EB032E
Database: BASE