| Title: |
A synthesis of bacterial and archaeal phenotypic trait data. |
| Authors: |
Madin JS; Nielsen DA; Brbic M; Corkrey R; Danko D; Edwards K; Engqvist MKM; Fierer N; Geoghegan JL; Gillings M; Kyrpides NC; Litchman E; Mason CE; Moore L; Nielsen SL; Paulsen IT; Price ND; Reddy TBK; Richards MA; Rocha EPC; Schmidt TM; Shaaban H; Shukla M; Supek F; Tetu SG; Vieira-Silva S; Wattam AR; Westfall DA; Westoby M |
| Publisher Information: |
NATURE PUBLISHING GROUP |
| Publication Year: |
2020 |
| Collection: |
University of Technology Sydney: OPUS - Open Publications of UTS Scholars |
| Description: |
A synthesis of phenotypic and quantitative genomic traits is provided for bacteria and archaea, in the form of a scripted, reproducible workflow that standardizes and merges 26 sources. The resulting unified dataset covers 14 phenotypic traits, 5 quantitative genomic traits, and 4 environmental characteristics for approximately 170,000 strain-level and 15,000 species-aggregated records. It spans all habitats including soils, marine and fresh waters and sediments, host-associated and thermal. Trait data can find use in clarifying major dimensions of ecological strategy variation across species. They can also be used in conjunction with species and abundance sampling to characterize trait mixtures in communities and responses of traits along environmental gradients. |
| Document Type: |
article in journal/newspaper |
| File Description: |
Electronic; application/pdf |
| Language: |
English |
| ISSN: |
2052-4463 |
| Relation: |
Scientific data; Scientific data, 2020, 7, (1); http://hdl.handle.net/10453/143459 |
| Availability: |
http://hdl.handle.net/10453/143459 |
| Rights: |
info:eu-repo/semantics/restrictedAccess |
| Accession Number: |
edsbas.644EFEB9 |
| Database: |
BASE |