| Title: |
Phylogenetic relationships and molecular delimitation of Culicoides Latreille (Diptera: Ceratopogonidae) species in the Afrotropical region : interest for the subgenus Avaritia |
| Authors: |
Bakhoum, M.T.; Labuschagne, Karien; Huber, K.; Fall, M.; Mathieu, B.; Venter, Gert Johannes; Gardes, L.; BAlget, T.; Bouyer, J.; Fall, A.G.; Gimonneau, G.; Garros, C. |
| Publisher Information: |
Wiley |
| Publication Year: |
2018 |
| Collection: |
University of Pretoria: UPSpace |
| Subject Terms: |
Avaritia; Ceratopogonidae; Culicoides latreille; Diptera; Phylogenetic relationships; Molecular delimitation; Afrotropical region |
| Description: |
Figure S1. Culicoides molecular phylogenetic relationships using the COI gene. Posterior probabilities and bootstrap values are presented for the most important nodes (asterisks indicate PPP 0.95 or BSP 95). ; Figure S2. Culicoides molecular phylogenetic relationships using the 16S rDNA gene. Posterior probabilities and bootstrap values are presented for the most important nodes (asterisks indicate PPP 0.95 or BSP 95). ; Figure S3. Culicoides molecular phylogenetic relationships using the 28S rDNA gene. Posterior probabilities and bootstrap values are presented for the most important nodes (asterisks indicate PPP 0.95 or BSP 95). ; Table S1. Culicoides specimen details, including COI, 16S rDNA and 28S rDNA sequences (-indicate missing sequence), GenBank accession numbers, and sample location information. ; Phylogenetic relationships of Culicoides species of the Afrotropical region are problematic as different authors disagree on the placement of species into specific subgenera or groups. In this study we sequenced two mitochondrial (COI and 16S rDNA) and two nuclear (CAD and 28S rDNA) gene fragments to reconstruct phylogenetic relationships within the Avaritia, Remmia and Synhelea subgenera and the Milnei, Neavei and Similis groups of Culicoides using both Bayesian inference and maximum-likelihood approaches. Based on phylogenetic trees, we used the bGMYC (Bayesian General Mixed Yule Coalescent model) and the PTP (Bayesian Poisson Tree Processes) to investigate species boundaries. All species relationships within the studied subgenera and groups were well-supported by using morphological characters and molecular analyses. The subgenus Avaritia includes (i) all of the species of the Imicola group, as well as the putative new species, C. sp. #22, and we confirmed the monophyly of this group; (ii) the Dasyops group includes C. kanagai and C. sp. #54 Meiswinkel (new species), shown to be monophyletic; (iii) the C. sp. #20 belongs to the Orientalis group; (iv) C. grahamii, C. gulbenkiani and C. kibatiensis. Our ... |
| Document Type: |
article in journal/newspaper |
| File Description: |
application/pdf |
| Language: |
English |
| Relation: |
http://hdl.handle.net/2263/71203 |
| DOI: |
10.1111/syen.12279 |
| Availability: |
http://hdl.handle.net/2263/71203; https://doi.org/10.1111/syen.12279 |
| Rights: |
© 2017 The Authors. Systematic Entomology published by John Wiley & Sons Ltd on behalf of Royal Entomological Society. This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs License. |
| Accession Number: |
edsbas.6F837DE7 |
| Database: |
BASE |