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Limits to the evolution of metabolic dependency in spatially structured microbial communities

Title: Limits to the evolution of metabolic dependency in spatially structured microbial communities
Authors: Ramesh, Divvya; Fara, Emanuele; Oschmann, Franziska; Stocker, Roman; van Vliet, Simon; Ackermann, Martin; Schubert, Olga; id_orcid:0 000-0002-2613-0714
Source: iScience, 29 (3)
Publisher Information: Cell Press
Publication Year: 2026
Collection: ETH Zürich Research Collection
Subject Terms: Cell biology; Evolutionary biology; Microbiology; Systems biology
Description: In microbial communities, evolutionary processes can lead to loss of biosynthetic pathways, creating metabolic dependencies. The Black Queen Hypothesis suggests that such gene loss can confer a fitness advantage by reducing metabolic burden. However, how these dependencies evolve at the level of individual cells in spatially structured communities remains poorly understood. We used a combination of microfluidic single-cell imaging and mathematical modeling to examine the early fate of auxotrophic mutants within E. coli populations. We found that without external amino acids, auxotroph growth is strongly constrained by low amino acid leakage from wildtype neighbors, and further reduced when they form local clusters that drain this limited amino acid pool. A growth advantage was only observed when amino acids were added or when leakage from wildtypes exceeded a threshold. Together, our results reveal insights into determinants of mutant invasion fitness and the trade-offs between reducing metabolic costs and maintaining metabolic autonomy. ; ISSN:2589-0042
Document Type: article in journal/newspaper
File Description: application/application/pdf
Language: English
Relation: info:eu-repo/semantics/altIdentifier/wos/001698029200001; info:eu-repo/grantAgreement/SNF/NCCR (NFS)/-180575; info:eu-repo/grantAgreement/SNF/NCCR (NFS)/-225148; https://hdl.handle.net/20.500.11850/796277
DOI: 10.3929/ethz-c-000796277
Availability: https://hdl.handle.net/20.500.11850/796277; https://doi.org/10.3929/ethz-c-000796277
Rights: info:eu-repo/semantics/openAccess ; http://creativecommons.org/licenses/by/4.0/ ; Creative Commons Attribution 4.0 International
Accession Number: edsbas.7CF40D6F
Database: BASE