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Meta-analysis uncovers genome-wide significant variants for rapid kidney function decline

Title: Meta-analysis uncovers genome-wide significant variants for rapid kidney function decline
Authors: Gorski, M; Jung, B; Li, Y; Matias-Garcia, PR; Wuttke, M; Coassin, S; Thio, CHL; Kleber, ME; Winkler, TW; Wanner, V; Chai, JF; Chu, AY; Cocca, M; Feitosa, MF; Ghasemi, S; Hoppmann, A; van der Horn, K; Li, M; Nutile, T; Scholz, M (Markus); Sieber, KB; Teumer, A; Tin, A; Wang, J; Tayo, BO; Ahluwalia, TS; Almgren, P; Bakker, SJL; Banas, B; Bansal, N; Biggs, ML; Boerwinkle, E; Bottinger, EP; Brenner, H; Carroll, R J; Chalmers, J; Chee, ML; Chee, MLA; Cheng, CY (Ching-Yu); Coresh, J; de Borst, MH; Degenhardt, F; Eckardt, KU; Endlich, K; Franke, A; Freitag-Wolf, S; Gampawar, P; Gansevoort, RT; Ghanbari, Mohsen; Gieger, C; Hamet, P; Ho, K; Hofer, E; Holleczek, B; Foo, VHX; Hutri-Kahonen, N; Hwang, SJ; Ikram, Arfan; Josyula, NS; Kahonen, M; Khor, CC; Koenig, W; Kramer, H; Kramer, BK; Kuhnel, B; Lange, LA; Lehtimaki, T; Lieb, W; Loos, RJF; Lukas, MA; Lyytikainen, LP; Meisinger, C; Meitinger, T; Melander, O; Milaneschi, Y; Mishra, PP; Mononen, N; Mychaleckyj, JC; Nadkarni, GN; Nauck, M; Nikus, K; Ning, B; Nolte, IM; O'Donoghue, ML; Orho-Melander, M; Pendergrass, SA; Penninx, B; Preuss, MH; Psaty, BM; Raffield, L M; Raitakari, OT; Rettig, R; Rheinberger, M; Rice, KM; Rosenkranz, AR; Rossing, P; Rotter, JI; Sabanayagam, C; Schmidt, H; Schmidt, R; Schottker, B; Schulz, C A; Sedaghat, Sanaz; Shaffer, CM; Strauch, K; Szymczak, S; Taylor, KD; Tremblay, J; Chaker, Layal; van der Harst, P; van der Most, PJ; Verweij, N; Volker, U; Waldenberger, M; Wallentin, L; Waterworth, DM; White, HD; Wilson, JG; Wong, TY; Woodward, M; Yang, Q; Yasuda, M; Yerges-Armstrong, LM; Zhang, Y; Snieder, H; Wanner, C; Boger, CA; Kottgen, A; Kronenberg, F; Pattaro, C; Heid, IM
Source: Gorski, M, Jung, B, Li, Y, Matias-Garcia, PR, Wuttke, M, Coassin, S, Thio, CHL, Kleber, ME, Winkler, TW, Wanner, V, Chai, JF, Chu, AY, Cocca, M, Feitosa, MF, Ghasemi, S, Hoppmann, A, van der Horn, K, Li, M, Nutile, T, Scholz, M, Sieber, KB, Teumer, A, Tin, A, Wang, J, Tayo, BO, Ahluwalia, TS, Almgren, P, Bakker, SJL, Banas, B, Bansal, N, Biggs, ML, Boerwinkle, E, Bottinger, EP, Brenner, H, Carroll, R J, Chalmers, J, Chee, ML, Chee, MLA, Cheng, CY, Coresh, J, de Borst, MH, Degenhardt, F, Eckardt, KU, Endlich, K, Franke, A, Freitag-Wolf, S, Gampawar, P, Gansevoort, ....
Publication Year: 2021
Subject Terms: /dk/atira/pure/keywords/researchprograms/AFL001000/EMCOR01; name=EMC OR-01
Description: Rapid decline of glomerular filtration rate estimated from creatinine (eGFRcrea) is associated with severe clinical endpoints. In contrast to cross-sectionally assessed eGFRcrea, the genetic basis for rapid eGFRcrea decline is largely unknown. To help define this, we meta-analyzed 42 genome-wide association studies from the Chronic Kidney Diseases Genetics Consortium and United Kingdom Biobank to identify genetic loci for rapid eGFRcrea decline. Two definitions of eGFRcrea decline were used: 3 mL/min/1.73m 2 /year or more (“Rapid3”; encompassing 34,874 cases, 107,090 controls) and eGFRcrea decline 25% or more and eGFRcrea under 60 mL/min/1.73m 2 at follow-up among those with eGFRcrea 60 mL/min/1.73m 2 or more at baseline (“CKDi25”; encompassing 19,901 cases, 175,244 controls). Seven independent variants were identified across six loci for Rapid3 and/or CKDi25: consisting of five variants at four loci with genome-wide significance (near UMOD-PDILT (2), PRKAG2, WDR72, OR2S2) and two variants among 265 known eGFRcrea variants (near GATM, LARP4B). All these loci were novel for Rapid3 and/or CKDi25 and our bioinformatic follow-up prioritized variants and genes underneath these loci. The OR2S2 locus is novel for any eGFRcrea trait including interesting candidates. For the five genome-wide significant lead variants, we found supporting effects for annual change in blood urea nitrogen or cystatin-based eGFR, but not for GATM or LARP4B. Individuals at high compared to those at low genetic risk (8-14 vs. 0-5 adverse alleles) had a 1.20-fold increased risk of acute kidney injury (95% confidence interval 1.08-1.33). Thus, our identified loci for rapid kidney function decline may help prioritize therapeutic targets and identify mechanisms and individuals at risk for sustained deterioration of kidney function.
Document Type: article in journal/newspaper
File Description: application/pdf
Language: English
ISSN: 0085-2538; 1523-1755
Relation: info:eu-repo/semantics/altIdentifier/pmid/33137338; info:eu-repo/semantics/altIdentifier/wos/000631134800001; info:eu-repo/semantics/altIdentifier/pissn/0085-2538; info:eu-repo/semantics/altIdentifier/eissn/1523-1755
DOI: 10.1016/j.kint.2020.09.030
Availability: https://pure.eur.nl/en/publications/03158a7f-67f6-4d2b-81b3-63565a2f9bdc; https://doi.org/10.1016/j.kint.2020.09.030; https://pure.eur.nl/ws/files/48447682/Repub_135174_O-A.pdf; https://www.scopus.com/pages/publications/85101404544; http://www.kidney-international.org/article/S0085253820312394/pdf
Rights: info:eu-repo/semantics/openAccess ; http://creativecommons.org/licenses/by-nc-nd/4.0/
Accession Number: edsbas.80633160
Database: BASE