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Genome wide data recover hierarchical genetic structure and help define conservation units for the threatened Asian Houbara

Title: Genome wide data recover hierarchical genetic structure and help define conservation units for the threatened Asian Houbara
Authors: Thierry Bernard Hoareau; Keiler Arthur Collier; Matthew J. Miller; Yves Hingrat; Eric Le Nuz; Nyambayar Batbayar; Ohad Hatzofe; Asaf Mayrose; Loïc Lesobre
Source: Scientific Reports, Vol 16, Iss 1, Pp 1-15 (2026)
Publisher Information: Nature Portfolio
Publication Year: 2026
Collection: Directory of Open Access Journals: DOAJ Articles
Subject Terms: Adaptive evolutionary conservation; Conservation strategy; DAPC; Partially migratory species; Runs of homozygosity; Whole genome sequencing; Medicine; Science
Description: The Asian Houbara Bustard (Chlamydotis macqueenii), a partially migratory bird from the western and Central Asian steppes, is listed as vulnerable on the IUCN Red List. This study reassesses the species’ genetic structure using modern genomics to identify evolutionary significant units (ESUs). Following the generation of a de novo reference assembly and resequencing data (114 birds, 10 locations), we integrated genetic results, migratory behaviour, and geography to identify eight hierarchically structured ESUs: four near range edges (Yemen, Mongolia, Eastern Kazakhstan, Israel) and four within the central range (Central-Eastern, Central-Western, North Iran, South Iran). Low genetic diversity and recent inbreeding make ESUs on the range periphery (Israel, Mongolia, Yemen) the most genetically threatened, consistent with the central-marginal hypothesis. ESUs do not cluster according to their migrant/non-migrant status. Geographic distance significantly shaped genetic structure, with longitudinal separation (isolation-by-distance along an east–west axis) emerging as the strongest predictor of differentiation, particularly among high-latitude migrant populations. Our findings underscore the importance of integrating genomic, geographic and behavioural criteria to define intraspecific units that effectively address the conservation needs of widespread species with complex evolutionary dynamics.
Document Type: article in journal/newspaper
Language: English
Relation: https://doi.org/10.1038/s41598-025-33691-3; https://doaj.org/toc/2045-2322; https://doaj.org/article/ef5ada1da57043c7b18e80a865dd4986
DOI: 10.1038/s41598-025-33691-3
Availability: https://doi.org/10.1038/s41598-025-33691-3; https://doaj.org/article/ef5ada1da57043c7b18e80a865dd4986
Accession Number: edsbas.8A0BF54A
Database: BASE