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Modelling trait heterogeneity and inferring causal links in the macroevolution of growth habit in eudicot angiosperms ; New Phytologist

Title: Modelling trait heterogeneity and inferring causal links in the macroevolution of growth habit in eudicot angiosperms ; New Phytologist
Authors: Neupane, Suman; Zanne, Amy E.; Lens, Frederic; Uyeda, Josef C.
Publisher Information: Wiley
Publication Year: 2026
Collection: VTechWorks (VirginiaTech)
Subject Terms: causal modeling; derived woodiness; eudicot angiosperms; growth habit evolution; phylogenetic comparative methods
Description: Phylogenetic comparative methods (PCMs) help researchers understand and predict trait evolutionary relationships. While improvements to PCMs have focused on increasing model complexity, understanding processes remains difficult due to persistent challenges in grounding complex models in biological reality and synthesizing findings across multiple analyses. We examined the evolution of growth habit in eudicots (75% of all angiosperms) and tested how variables such as vessel diameter, leaf phenology, and minimum temperature influence macroevolutionary inference. We used a series of PCMs to synthesize our understanding of trait interrelationships, explored plausible causal relationships using phylogenetic path analysis, and employed phylogenetic cross-validation to assess predictive performance among taxa. We found that discrete coding of growth form was linked to other measured and unmeasured traits, and that these interrelationships can help overcome limitations arising from incomplete data and simplistic coding of complex traits. Analysis of growth form using phylogenetic path analysis helps reconcile competing views of trait interrelationships from previous studies. Furthermore, including identified covariates improves prediction of growth habit and other traits. Our study shows that incorporating causal structure improves macroevolutionary inference, identifies when analyses that omit key causal traits become unreliable, and underscores the importance of integrating phylogenetic models with natural-history knowledge. ; Published version
Document Type: article in journal/newspaper
File Description: application/pdf
Language: English
Relation: https://www.ncbi.nlm.nih.gov/pubmed/41574446; nph.70870 (Article number); https://hdl.handle.net/10919/141066; https://doi.org/10.1111/nph.70870
DOI: 10.1111/nph.70870
Availability: https://hdl.handle.net/10919/141066; https://doi.org/10.1111/nph.70870
Rights: In Copyright ; http://rightsstatements.org/vocab/InC/1.0/
Accession Number: edsbas.9A7BF84E
Database: BASE