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Identification and Characterization of WRKY Genes in Amaranthuspalmeri and Their Response to Abiotic Stress

Title: Identification and Characterization of WRKY Genes in Amaranthuspalmeri and Their Response to Abiotic Stress
Authors: Xusi Liu; Youning Wang; Guoping Zhu; Daniel Bimpong; Wang Chen; Yan Li; Dongfang Ma
Source: Horticulturae ; Volume 12 ; Issue 3 ; Pages: 314
Publisher Information: Multidisciplinary Digital Publishing Institute
Publication Year: 2026
Collection: MDPI Open Access Publishing
Subject Terms: chlorophyll; gene expression; herbicide management; stress response; weed
Subject Geographic: agris
Description: The WRKY transcription factors (TFs) are key regulators of plant responses to biotic and abiotic stresses. However, their roles in Amaranthus palmeri remain unexplored. In this study, 32 ApWRKYs were identified through bioinformatics and gene expression analyses. Subcellular localization predictions placed ApWRKYs in the nucleus, and transient expression assays of ApWRKY2 and ApWRKY5 confirmed nuclear targeting, supporting their role as transcriptional regulators. ApWRKYs are distributed across 15 genomic scaffolds, and phylogenetic analysis grouped them into three subfamilies, with conserved motifs identified within specific clades. Interaction analysis suggested potential post-transcriptional regulation by miRNAs. Gene expression profiling of ApWRKYs under glufosinate ammonium, NaCl, and PEG-induced osmotic stress treatments revealed potential distinct regulatory roles. Furthermore, transient overexpression in Arabidopsis thaliana found that ApWRKY1, ApWRKY2, and ApWRKY5 potentially regulate chlorophyll fluorescence and photosynthetic efficiency under glufosinate treatment. These findings establish ApWRKYs as central regulators of stress adaptation in A. palmeri, provide novel insights into WRKY-mediated regulation, and lay a foundation for future functional investigations aimed at enhancing stress resilience and herbicide management in horticultural systems.
Document Type: text
File Description: application/pdf
Language: English
Relation: Floriculture, Nursery and Landscape, and Turf; https://dx.doi.org/10.3390/horticulturae12030314
DOI: 10.3390/horticulturae12030314
Availability: https://doi.org/10.3390/horticulturae12030314
Rights: https://creativecommons.org/licenses/by/4.0/
Accession Number: edsbas.A0C37837
Database: BASE