In silico comparison of vCircTrappist with CIRI2.
| Title: | In silico comparison of vCircTrappist with CIRI2. |
|---|---|
| Authors: | Alexis S. Chasseur; Maxime Bellefroid; Mathilde Galais; Meijiao Gong; Pierre Lombard; Sarah Mathieu; Amandine Pecquet; Estelle Plant; Camille Ponsard; Laure Vreux; Carlo Yague-Sanz; Benjamin G. Dewals; Nicolas A. Gillet; Benoît Muylkens; Carine M. Van Lint; Damien Coupeau |
| Publication Year: | 2025 |
| Subject Terms: | Medicine; Microbiology; Genetics; Molecular Biology; Evolutionary Biology; Immunology; Infectious Diseases; Virology; Biological Sciences not elsewhere classified; +non%22">xlink "> non; unconventional splicing mechanisms; sanger sequencings validated; recent attention focused; obtained novel insights; initially anticipated due; identify backsplicing events; human pathogens belonging; existing datasets encompassing; conserved eukaryotic patterns; coding rnas play; viral infection cycles; viral genomes include; unique viral characteristics; rna sequencing data; developed bioinformatic tool; various viral families; bioinformatic pipeline tailored; families |
| Description: | (A, B) Sensitivity (true positive rate) of the detection of canonical (A) or non-canonical (B) backsplicing events from reads originating from indicated viral genomes. (C, D) Specificity (1 - false positive rate) of the detection of canonical (C) or non-canonical (D) backsplicing events from reads originating from indicated viral genomes. (E, F) Venn diagrams indicating the number of specific or common unique canonical (E) or non-canonical (F) backsplice junctions by CIRI2 and vCircTrappist from reads originating from indicated viral genomes. |
| Document Type: | still image |
| Language: | unknown |
| Relation: | https://figshare.com/articles/figure/_i_In_silico_i_comparison_of_vCircTrappist_with_CIRI2_/30105338 |
| DOI: | 10.1371/journal.ppat.1013448.g002 |
| Availability: | https://doi.org/10.1371/journal.ppat.1013448.g002; https://figshare.com/articles/figure/_i_In_silico_i_comparison_of_vCircTrappist_with_CIRI2_/30105338 |
| Rights: | CC BY 4.0 |
| Accession Number: | edsbas.A5DF316B |
| Database: | BASE |