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Parallel evolution of plant alkaloid biosynthesis from bacterial-like decarboxylases

Title: Parallel evolution of plant alkaloid biosynthesis from bacterial-like decarboxylases
Authors: GROGAN, GIDEON JAMES; WOOD, CATHARINE; Jiang, Zhouqian; Armanath, Inesh; Waddell, Lachlan James Noble; Batey, Uma Sophia; Daza, Oriana Serna; NEWLING, KATHERINE; James, Sally; UNSWORTH, WILLIAM PAUL; Lichman, Benjamin R.
Publication Year: 2026
Collection: White Rose Research Online (Universities of Leeds, Sheffield & York)
Description: Alkaloids are nitrogen-containing natural products derived from amino acids. The basic amino acids lysine and ornithine are precursors to a wide range of alkaloids including the bioactive compounds nicotine, hyoscyamine and securinine. Isotope feeding experiments have shown that the amino acids can be incorporated into alkaloids in a symmetric or nonsymmetric manner. The symmetric pathway is catalysed by two enzymes, a decarboxylase and oxidase, forming a cyclic iminium which acts as the electrophile in the scaffold forming step. Here, we describe the ornithine/lysine/arginine decarboxylase-oxidases (OLADOs), PLP-dependent enzymes responsible for the nonsymmetric pathway, catalysing the single step decarboxylative oxidative deamination of lysine, ornithine or arginine. These enzymes are part of the group III ornithine/lysine/arginine decarboxylase-like family (OLADLs), previously exclusively associated with prokaryotes. We reveal OLADLs to be widespread in plants and show that OLADOs have repeatedly emerged through parallel evolution from OLADLs, via similar active site substitutions. This investigation introduces a new class of eukaryotic decarboxylases, and describes enzymes involved in multiple alkaloid biosynthesis pathways. It furthermore demonstrates how the principle of parallel evolution at a genomic and enzymatic level can be leveraged for gene discovery across multiple lineages.
Document Type: article in journal/newspaper
File Description: text
Language: English
ISSN: 1469-8137
Relation: https://eprints.whiterose.ac.uk/id/eprint/236519/1/Accepted_Manuscript.pdf; GROGAN, GIDEON JAMES orcid.org/0000-0003-1383-7056 , WOOD, CATHARINE, Jiang, Zhouqian et al. (8 more authors) (2026) Parallel evolution of plant alkaloid biosynthesis from bacterial-like decarboxylases. New Phytologist. ISSN: 1469-8137
DOI: 10.1111/nph.70884
Availability: https://eprints.whiterose.ac.uk/id/eprint/236519/; https://eprints.whiterose.ac.uk/id/eprint/236519/1/Accepted_Manuscript.pdf; https://doi.org/10.1111/nph.70884
Rights: cc_by
Accession Number: edsbas.A6318E40
Database: BASE