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Genome editing of an African elite rice variety confers resistance against endemic and emerging Xanthomonas oryzae pv. oryzae strains

Title: Genome editing of an African elite rice variety confers resistance against endemic and emerging Xanthomonas oryzae pv. oryzae strains
Authors: Schepler-Luu, Van; Sciallano, Coline; Stiebner, Melissa; Ji, Chonghui; Boulard, Gabriel; Diallo, Amadou; Auguy, Florence; Char, Si Nian; Arra, Yugander; Schenstnyi, Kyrylo; Buchholzer, Marcel; Loo, Eliza PI; Bilaro, Atugonza L; Lihepanyama, David; Mkuya, Mohammed; Murori, Rosemary; Oliva, Ricardo; Cunnac, Sebastien; Yang, Bing; Szurek, Boris; Frommer, Wolf B
Source: Ji, Chonghui; Boulard, Gabriel; Diallo, Amadou; Auguy, Florence; Char, Si Nian; Arra, Yugander; Schenstnyi, Kyrylo; Buchholzer, Marcel; Loo, Eliza PI; Bilaro, Atugonza L; Lihepanyama, David; Mkuya, Mohammed; Murori, Rosemary; Oliva, Ricardo; Cunnac, Sebastien; Yang, Bing; Szurek, Boris and Frommer, Wolf B. 2023. Genome editing of an African elite rice variety confers resistance against endemic and emerging Xanthomonas oryzae pv. oryzae strains. , Volume 12
Publisher Information: eLife Sciences Publications, Ltd.
Publication Year: 2024
Collection: CGIAR CGSpace (Consultative Group on International Agricultural Research)
Subject Terms: rice; livelihood; asia; africa; americas; tanzania
Description: Bacterial leaf blight (BB) of rice, caused by Xanthomonas oryzae pv. oryzae (Xoo), threatens global food security and the livelihood of small-scale rice producers. Analyses of Xoo collections from Asia, Africa and the Americas demonstrated complete continental segregation, despite robust global rice trade. Here, we report unprecedented BB outbreaks in Tanzania. The causative strains, unlike endemic African Xoo, carry Asian-type TAL effectors targeting the sucrose transporter SWEET11a and iTALes suppressing Xa1. Phylogenomics clustered these strains with Xoo from Southern-China. African rice varieties do not carry effective resistance. To protect African rice production against this emerging threat, we developed a hybrid CRISPR-Cas9/Cpf1 system to edit all known TALe-binding elements in three SWEET promoters of the East African elite variety Komboka. The edited lines show broad-spectrum resistance against Asian and African strains of Xoo, including strains recently discovered in Tanzania. The strategy could help to protect global rice crops from BB pandemics.
Document Type: article in journal/newspaper
Language: English
Relation: https://hdl.handle.net/10568/163930
Availability: https://hdl.handle.net/10568/163930
Rights: Open Access
Accession Number: edsbas.AA200822
Database: BASE