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Exome sequencing in BRCA1-2 candidate familias: the contribution of other cancer susceptibility genes

Title: Exome sequencing in BRCA1-2 candidate familias: the contribution of other cancer susceptibility genes
Authors: Doddato G; Valentino F; Giliberti A; Papa FT; Tita R; Bruno LP; Resciniti S; Fallerini C; Benetti E; Palmieri M; Mencarelli MA; Fabbiani A; Bruttini M; Orrico A; Baldassarri M; Fava F; Lopergolo D; Lo Rizzo C; Lamacchia V; Mannucci S; Pinto AM; Currò A; Mancini V; Oncologic Multidisciplinary Team, Azienda Ospedaliera Universitaria Senese; Oncologic Multidisciplinary Team, Azienda Usl Toscana Sud Est; Mari F; Renieri A; Ariani F
Contributors: Doddato, G; Valentino, F; Giliberti, A; Papa, Ft; Tita, R; Bruno, Lp; Resciniti, S; Fallerini, C; Benetti, E; Palmieri, M; Mencarelli, Ma; Fabbiani, A; Bruttini, M; Orrico, A; Baldassarri, M; Fava, F; Lopergolo, D; Lo Rizzo, C; Lamacchia, V; Mannucci, S; Pinto, Am; Currò, A; Mancini, V; Oncologic Multidisciplinary Team, Azienda Ospedaliera Universitaria Senese; Oncologic Multidisciplinary Team, Azienda Usl Toscana Sud Est; Mari, F; Renieri, A; Ariani, F
Publication Year: 2021
Collection: Università degli Studi di Siena: USiena air
Subject Terms: BRCA1; BRCA2; cancer susceptibility gene; HBOC; WES (Whole Exome Sequencing)
Description: Hereditary Breast and Ovarian Cancer (HBOC) syndrome is a condition in which the risk of breast and ovarian cancer is higher than in the general population. The prevalent pathogenesis is attributable to inactivating variants of the BRCA1-2 highly penetrant genes, however, other cancer susceptibility genes may also be involved. By Whole Exome Sequencing (WES) we analyzed a series of 200 individuals selected for genetic testing in BRCA1-2 genes according to the updated National Comprehensive Cancer Network (NCCN) guidelines. Analysis by MLPA was performed to detect large BRCA1-2 deletions/duplications. Focusing on BRCA1-2 genes, data analysis identified 11 cases with pathogenic variants (4 in BRCA1 and 7 in BRCA1-2) and 12 with uncertain variants (7 in BRCA1 and 5 in BRCA2). Only one case was found with a large BRCA1 deletion. Whole exome analysis allowed to characterize pathogenic variants in 21 additional genes: 10 genes more traditionally associated to breast and ovarian cancer (ATM, BRIP1, CDH1, PALB2, PTEN, RAD51C, and TP53) (5% diagnostic yield) and 11 in candidate cancer susceptibility genes (DPYD, ERBB3, ERCC2, MUTYH, NQO2, NTHL1, PARK2, RAD54L, and RNASEL). In conclusion, this study allowed a personalized risk assessment and clinical surveillance in an increased number of HBOC families and to broaden the spectrum of causative variants also to candidate “non-canonical” genes. © Copyright © 2021 Doddato, Valentino, Giliberti, Papa, Tita, Bruno, Resciniti, Fallerini, Benetti, Palmieri, Mencarelli, Fabbiani, Bruttini, Orrico, Baldassarri, Fava, Lopergolo, Lo Rizzo, Lamacchia, Mannucci, Pinto, Currò, Mancini, Oncologic Multidisciplinary Team, Azienda Ospedaliera Universitaria Senese, Oncologic Multidisciplinary Team, Azienda Usl Toscana Sud Est, Mari, Renieri and Ariani.
Document Type: article in journal/newspaper
File Description: ELETTRONICO
Language: English
Relation: info:eu-repo/semantics/altIdentifier/pmid/34026625; info:eu-repo/semantics/altIdentifier/wos/WOS:000652638900001; volume:11; numberofpages:13; journal:FRONTIERS IN ONCOLOGY; https://hdl.handle.net/11365/1224417; https://www.frontiersin.org/journals/oncology/articles/10.3389/fonc.2021.649435/full; https://pmc.ncbi.nlm.nih.gov/articles/PMC8139251/
DOI: 10.3389/fonc.2021.649435
DOI: 10.3389/fonc.2021.649435/full
Availability: https://hdl.handle.net/11365/1224417; https://doi.org/10.3389/fonc.2021.649435; https://www.frontiersin.org/journals/oncology/articles/10.3389/fonc.2021.649435/full; https://pmc.ncbi.nlm.nih.gov/articles/PMC8139251/
Rights: info:eu-repo/semantics/openAccess
Accession Number: edsbas.AE04981B
Database: BASE