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Community Curation of Nomenclatural and Taxonomic Information in the Context of the Collection Management System JACQ

Title: Community Curation of Nomenclatural and Taxonomic Information in the Context of the Collection Management System JACQ
Authors: Rainer,Heimo; Berger,Andreas; Schuster,Tanja; Walter,Johannes; Reich,Dieter; Zernig,Kurt; Danihelka,Jiří| orcid:0000-0002-2640-7867; Galušková,Hana; Mráz,Patrik; Tkach,Natalia; Hentschel,Jörn; Müller,Jochen; Wagner,Sarah; Berendsohn,Walter G.; Lücking,Robert; Vogt,Robert; Pignotti,Lia; Roma-Marzio,Francesco; Peruzzi,Lorenzo
Source: Biodiversity Information Science and Standards 7: e112571
Publisher Information: Pensoft Publishers
Publication Year: 2023
Collection: Pensoft Publishers
Subject Terms: nomenclature; floras; taxonomy; PID; linked data; IIIF
Description: Nomenclatural and taxonomic information are crucial for curating botanical collections. In the course of changing methods for systematic and taxonomic studies, classification systems changed considerably over time (Dalla Torre and Harms 1900, Durand and Bentham 1888, Endlicher 1836, Angiosperm Phylogeny Group et al. 2016). Various approaches to store preserved material have been implemented, most of them based on scientific names (e.g., families, genera, species) often in combination with other criteria such as geographic provenance or collectors.The collection management system, JACQ, was established in the early 2000s then developed to support multiple institutions. It features a centralised data storage (with mirror sites) and access via the Internet. Participating collections can download their data at any time in a comma-separated values (CSV) format. From the beginning, JACQ was conceived as a collaboration platform for objects housed in botanical collections, i.e., plant, fungal and algal groups. For these groups, various sources of taxonomic reference exist, nowadays online resources are preferred, e.g., Catalogue of Life, AlgaeBase, Index Fungorum, Mycobank, Tropicos, Plants of the World Online, International Plant Names Index (IPNI), World Flora Online, Euro+Med, Anthos, Flora of Northamerica, REFLORA, Flora of China, Flora of Cuba, Australian Virtual Herbarium (AVH).Implementation and (re)use of PIDsPersistent identifiers (PIDs) for names (at any taxonomic rank) apart from PIDs for taxa, are essential to allow and support reliable referencing across institutions and thematic research networks (Agosti et al. 2022). For this purpose we have integrated referencing to several of the above mentioned resources and populate the names used inside JACQ with those external PIDs. For example, Salix rosmarinifolia is accepted in Plants of the World Online while Euro+Med Plantbase considers it a synonym of Salix repens subsp. rosmarinifolia. Either one can be an identification of a specimen in the JACQ ...
Document Type: conference object
File Description: text/html
Language: English
ISSN: 2535-0897
Relation: info:eu-repo/semantics/altIdentifier/eissn/2535-0897
DOI: 10.3897/biss.7.112571
Availability: https://doi.org/10.3897/biss.7.112571; https://biss.pensoft.net/article/112571/; https://biss.pensoft.net/article/112571/download/pdf/
Rights: info:eu-repo/semantics/openAccess ; CC BY 4.0
Accession Number: edsbas.BBE02327
Database: BASE