| Title: |
Global disparities in SARS-CoV-2 genomic surveillance |
| Authors: |
Brito, AF; Semenova, E; Dudas, G; Hassler, GW; Kalinich, CC; Kraemer, MUG; Ho, J; Tegally, H; Githinji, G; Agoti, CN; Matkin, LE; Whittaker, C; Consortium, Danish Covid-19 Genome; Project, COVID-19 Impact; (NGS-SA), Network for Genomic Surveillance in South Africa; team, GISAID core curation; Howden, BP; Sintchenko, V; Zuckerman, NS; Mor, O; Blankenship, HM; de Oliveira, T; Lin, RTP; Siqueira, MM; Resende, PC; Vasconcelos, ATR; Spilki, FR; Aguiar, RS; Alexiev, I; Ivanov, IN; Philipova, I; Carrington, CVF; Sahadeo, NSD; Gurry, C; Maurer-Stroh, S; Naidoo, D; von Eije, KJ; Perkins, MD; van Kerkhove, M; Hill, SC; Sabino, EC; Pybus, OG; Dye, C; Bhatt, S; Flaxman, S; Suchard, MA; Grubaugh, ND; Baele, G; Faria, NR |
| Publication Year: |
2024 |
| Collection: |
Oxford University Research Archive (ORA) |
| Description: |
Genomic sequencing provides critical information to track the evolution and spread of SARS-CoV-2, optimize molecular tests, treatments and vaccines, and guide public health responses. To investigate the spatiotemporal heterogeneity in the global SARS-CoV-2 genomic surveillance, we estimated the impact of sequencing intensity and turnaround times (TAT) on variant detection in 167 countries. Most countries submit genomes >21 days after sample collection, and 77% of low and middle income countries sequenced |
| Document Type: |
other/unknown material |
| Language: |
English |
| Relation: |
https://doi.org/10.1101/2021.08.21.21262393 |
| DOI: |
10.1101/2021.08.21.21262393 |
| Availability: |
https://doi.org/10.1101/2021.08.21.21262393; https://ora.ox.ac.uk/objects/uuid:03655ea8-0036-4d57-bf9a-9daadf8bc4b0 |
| Rights: |
info:eu-repo/semantics/openAccess ; CC Attribution-NoDerivatives (CC BY-ND) |
| Accession Number: |
edsbas.C0795351 |
| Database: |
BASE |