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Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Title:	Systematic assessment of long-read RNA-seq methods for transcript identification and quantification
Authors:	Pardo-Palacios, Francisco J.^Aff1; Wang, Dingjie^{Aff2, Aff3}; Reese, Fairlie^{Aff4, Aff5}; Diekhans, Mark^Aff6; Carbonell-Sala, Sílvia^Aff7; Williams, Brian^Aff8; Loveland, Jane E.^Aff9; De María, Maite^{Aff10, Aff11}; Adams, Matthew S.^Aff12; Balderrama-Gutierrez, Gabriela^{Aff4, Aff5}; Behera, Amit K.^Aff13; Gonzalez Martinez, Jose M.^Aff9; Hunt, Toby^Aff9; Lagarde, Julien^{Aff7, Aff14}; Liang, Cindy E.^Aff12; Li, Haoran^{Aff2, Aff3}; Meade, Marcus Jerryd^Aff15; Moraga Amador, David A.^Aff16; Prjibelski, Andrey D.^{Aff17, Aff18}; Birol, Inanc^Aff19; Bostan, Hamed^Aff20; Brooks, Ashley M.^Aff20; Çelik, Muhammed Hasan^{Aff4, Aff5}; Chen, Ying^Aff21; Du, Mei R. M.^Aff22; Felton, Colette^Aff13; Göke, Jonathan^{Aff21, Aff23}; Hafezqorani, Saber^Aff19; Herwig, Ralf^Aff24; Kawaji, Hideya^Aff25; Lee, Joseph^Aff21; Li, Jian-Liang^Aff20; Lienhard, Matthias^Aff24; Mikheenko, Alla^Aff26; Mulligan, Dennis^Aff13; Nip, Ka Ming^Aff19; Pertea, Mihaela^{Aff27, Aff28}; Ritchie, Matthew E.^{Aff22, Aff29}; Sim, Andre D.^Aff21; Tang, Alison D.^Aff13; Wan, Yuk Kei^{Aff21, Aff30}; Wang, Changqing^Aff22; Wong, Brandon Y.^{Aff27, Aff28}; Yang, Chen^Aff19; Barnes, If^Aff9; Berry, Andrew E.^Aff9; Capella-Gutierrez, Salvador^Aff31; Cousineau, Alyssa^Aff32; Dhillon, Namrita^Aff13; Fernandez-Gonzalez, Jose M.^Aff31; Ferrández-Peral, Luis^Aff1; Garcia-Reyero, Natàlia^Aff33; Götz, Stefan^Aff34; Hernández-Ferrer, Carles^Aff31; Kondratova, Liudmyla^Aff35; Liu, Tianyuan^Aff36; Martinez-Martin, Alessandra^Aff1; Menor, Carlos^Aff34; Mestre-Tomás, Jorge^Aff1; Mudge, Jonathan M.^Aff9; Panayotova, Nedka G.^Aff16; Paniagua, Alejandro^Aff1; Repchevsky, Dmitry^Aff31; Ren, Xingjie^Aff37; Rouchka, Eric^Aff38; Saint-John, Brandon^Aff13; Sapena, Enrique^Aff39; Sheynkman, Leon^Aff15; Smith, Melissa Laird^Aff38; Suner, Marie-Marthe^Aff9; Takahashi, Hazuki^Aff40; Youngworth, Ingrid A.^Aff41; Carninci, Piero^{Aff40, Aff42}; Denslow, Nancy D.^{Aff10, Aff43}; Guigó, Roderic^{Aff7, Aff44}; Hunter, Margaret E.^Aff45; Maehr, Rene^Aff32; Shen, Yin^Aff46; Tilgner, Hagen U.^Aff47; Wold, Barbara J.^Aff8; Vollmers, Christopher^{Aff13, IDs41592024022983_cor81}; Frankish, Adam^{Aff9, IDs41592024022983_cor82}; Au, Kin Fai^{Aff2, Aff3, IDs41592024022983_cor83}; Sheynkman, Gloria M.^{Aff15, Aff48, Aff49, IDs41592024022983_cor84}; Mortazavi, Ali^{Aff4, Aff5, IDs41592024022983_cor85}; Conesa, Ana^{Aff1, Aff50, IDs41592024022983_cor86}; Brooks, Angela N.^{Aff6, Aff13, IDs41592024022983_cor87}
Source:	Nature Methods: Techniques for life scientists and chemists. 21(7):1349-1363
Database:	Springer Nature Journals