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1
Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions

von Gong, BS ; Li, D ; Kusko, R ; et al.

Schlagworte: Oncopanel sequencing; Target enrichment; Molecular diagnostics; Reproducibility; Analytical performance; Precision medicine; TUMOR MUTATIONAL BURDEN; LUNG-CANCER PATIENTS; QUALITY-CONTROL; IMPACT; PATHOLOGISTS; VALIDATION; BIOMARKER; TARGETS; ASSAY; Biomedicine; Genetics; developmental biology; physiology
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2
Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions

von Gong, B ; Li, D ; Kusko, R ; et al.

urn:ISSN:1474-7596 ; urn:ISSN:1474-760X ; Genome Biology, 22, 1, 109

Schlagworte: 31 Biological Sciences; 32 Biomedical and Clinical Sciences; 3105 Genetics; Cancer; Genetics; Cancer Genomics; Human Genome; 3 Good Health and Well Being; Biomarkers; Tumor; DNA Copy Number Variations; Genetic Testing; Genomics; Humans; Molecular Diagnostic Techniques; Mutation; Neoplasms; Oncogenes; Polymorphism; Single Nucleotide; Reproducibility of Results; Sensitivity and Specificity; Analytical performance; Molecular diagnostics; Oncopanel sequencing; Precision medicine; Reproducibility; Target enrichment; anzsrc-for: 31 Biological Sciences; anzsrc-for: 32 Biomedical and Clinical Sciences
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3
Generic Protocols for the Analytical Validation of Next-Generation Sequencing-Based Circulating Tumor DNA Assays, Version 2.0.

von Silvestro A ; Baden J ; Billings K ; et al.

JCO precision oncology [JCO Precis Oncol] 2026 May; Vol. 10 (5), pp. e2501243. Date of Electronic Publication: 2026 May 11.
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4
Analytical Validation of Blood-Derived Tumor Mutation Burden (bTMB) Assays: A Joint Consensus Recommendation of the BLOODPAC bTMB Analytical Validation Working Group.

von Baden J ; Sausen M ; Anfora AT ; et al.

The Journal of molecular diagnostics : JMD [J Mol Diagn] 2025 Oct; Vol. 27 (10), pp. 914-919.
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5
Phase II Study of Vismodegib in Patients With SMO- or PTCH1-Mutated Tumors: Results From the National Cancer Institute Molecular Analysis for Therapy Choice Eastern Cooperative Oncology Group-American College of Radiology Imaging Network Trial (EAY131) Subprotocol T.

von Tsao AS ; Song Z ; Ho AL ; et al.

JCO precision oncology [JCO Precis Oncol] 2025 Oct; Vol. 9, pp. e2500119. Date of Electronic Publication: 2025 Oct 09.
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6
Targeted DNA-seq and RNA-seq of Reference Samples with Short-read and Long-read Sequencing.

von Gong B ; Li D ; Łabaj PP ; et al.

Scientific data [Sci Data] 2024 Aug 16; Vol. 11 (1), pp. 892. Date of Electronic Publication: 2024 Aug 16.
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7
Deep oncopanel sequencing reveals within block position-dependent quality degradation in FFPE processed samples.

von Zhang Y ; Blomquist TM ; Kusko R ; et al.

Genome biology [Genome Biol] 2022 Jun 29; Vol. 23 (1), pp. 141. Date of Electronic Publication: 2022 Jun 29.
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8
Advancing NGS quality control to enable measurement of actionable mutations in circulating tumor DNA.

von Willey JC ; Morrison TB ; Austermiller B ; et al.

Cell reports methods [Cell Rep Methods] 2021 Nov 03; Vol. 1 (7), pp. 100106. Date of Electronic Publication: 2021 Nov 03 (Print Publication: 2021).
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9
Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology.

von Deveson IW ; Gong B ; Lai K ; et al.

Nature biotechnology [Nat Biotechnol] 2021 Sep; Vol. 39 (9), pp. 1115-1128. Date of Electronic Publication: 2021 Apr 12.
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10
Current practice patterns in nodal evaluation and adjuvant treatment of advanced stage endometrioid endometrial cancer: An SGO survey.

von Parker JE ; Miller DS ; Lee J ; et al.

Gynecologic oncology reports [Gynecol Oncol Rep] 2020 Aug 07; Vol. 34, pp. 100620. Date of Electronic Publication: 2020 Aug 07 (Print Publication: 2020).
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11
Practice patterns using minimally invasive surgery for the treatment of ovarian cancer: A survey of physician members of the Society of Gynecologic Oncologists.

von Kremer KM ; Lee J ; Carlson MJ ; et al.

Gynecologic oncology reports [Gynecol Oncol Rep] 2020 Aug 03; Vol. 33, pp. 100617. Date of Electronic Publication: 2020 Aug 03 (Print Publication: 2020).
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