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1
Genomic and clinical epidemiology of SARS-CoV-2 in coastal Kenya: insights into variant circulation, reinfection, and multiple lineage importations during a post-pandemic wave

von Arnold W. Lambisia ; Esther N. Katama ; Edidah Moraa ; et al.

BMC Global and Public Health, Vol 3, Iss 1, Pp 1-16 (2025)

Schlagworte: COVID-19; SARS-CoV-2; Omicron; XBB.2.3; JN.1; Reinfections; Public aspects of medicine; RA1-1270
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2
Surveillance of respiratory viruses at health facilities from across Kenya, 2014 [version 4; peer review: 2 approved, 1 approved with reservations]

von Martin Mutunga ; Lilian Mayieka ; Everlyn Kamau ; et al.

Wellcome Open Research, Vol 7 (2025)

Schlagworte: human rhinoviruses; respiratory syncytial viruses; influenza viruses; endemic human coronaviruses; adenoviruses; multiplex RT-PCR; eng; Medicine; Science
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3
Epidemiological dynamics of influenza B virus across multiple seasons in Kenya and Uganda inferred from sequence data, 2010–2021

von Brenda K. Nyarango ; D. Collins Owuor ; Everlyne Isoe ; et al.

BMC Infectious Diseases, Vol 25, Iss 1, Pp 1-12 (2025)

Schlagworte: IBV; B/Victoria; B/Yamagata; Infectious and parasitic diseases; RC109-216
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4
The cost of care for children hospitalized with respiratory syncytial virus (RSV) associated lower respiratory infection in Kenya

von Joyce U. Nyiro ; Bryan O. Nyawanda ; Martin Mutunga ; et al.

BMC Public Health, Vol 24, Iss 1, Pp 1-12 (2024)

Schlagworte: Respiratory syncytial virus; Hospitalization; Cost; Households; Health System; Public aspects of medicine; RA1-1270
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5
Spatio-temporal distribution of rhinovirus types in Kenya: a retrospective analysis, 2014

von John Mwita Morobe ; Everlyn Kamau ; Martha M. Luka ; et al.

Scientific Reports, Vol 14, Iss 1, Pp 1-11 (2024)

Schlagworte: Rhinovirus; Phylogenetics; Transmission; Spatio-temporal distribution; Kenya; Medicine; Science
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6
Temporal changes in the positivity rate of common enteric viruses among paediatric admissions in coastal Kenya, during the COVID-19 pandemic, 2019–2022

von Arnold W. Lambisia ; Nickson Murunga ; Martin Mutunga ; et al.

Gut Pathogens, Vol 16, Iss 1, Pp 1-8 (2024)

Schlagworte: COVID-19; Rotavirus group A; Norovirus GII; Astrovirus; Sapovirus; Adenovirus F40/41; Diseases of the digestive system. Gastroenterology; RC799-869
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7
New SARS-CoV-2 Omicron Variant with Spike Protein Mutation Y451H, Kilifi, Kenya, March–May 2023

von Mike J. Mwanga ; Arnold W. Lambisia ; John Mwita Morobe ; et al.

Emerging Infectious Diseases, Vol 29, Iss 11, Pp 2376-2379 (2023)

Schlagworte: COVID-19; Omicron; respiratory infections; severe acute respiratory syndrome coronavirus 2; SARS-CoV-2; SARS; Medicine; Infectious and parasitic diseases; RC109-216
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8
Respiratory syncytial virus hospitalisation by chronological month of age and by birth month in infants

von Guo, Ling ; Kenmoe, Sebastien ; Miyake, Fuyu ; et al.

Nature Communications. 16(1)
- Zum Volltext in PubMed Central
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9
Validation of saline, PBS and a locally produced VTM at varying storage conditions to detect the SARS-CoV-2 virus by qRT-PCR

von Caroline Ngetsa ; Victor Osoti ; Dorcas Okanda ; et al.

PLoS ONE, Vol 18, Iss 2 (2023)

Schlagworte: Medicine; Science
- Zum Volltext in DOAJ
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10
Maintaining laboratory quality assurance and safety in a pandemic: Experiences from the KEMRI-Wellcome Trust Research Programme laboratory’s COVID-19 response [version 2; peer review: 2 approved]

von Shadrack Mutua ; Brian Bartilol ; Debra Riako ; et al.

Wellcome Open Research, Vol 6 (2022)

Schlagworte: Quality management system; laboratory pandemic response; quality assurance; coronavirus disease; COVID-19 testing; COVID-19 pandemic; eng; Medicine; Science
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11
An optimization of four SARS-CoV-2 qRT-PCR assays in a Kenyan laboratory to support the national COVID-19 rapid response teams [version 2; peer review: 2 approved]

von Shadrack Mutua ; Brian Bartilol ; Shaban J. Mwangi ; et al.

Wellcome Open Research, Vol 5 (2022)

Schlagworte: COVID-19; SARS-CoV-2; coronavirus; qRT-PCR; diagnosis; optimization; eng; Medicine; Science
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12
Enrichment approach for unbiased sequencing of respiratory syncytial virus directly from clinical samples [version 1; peer review: 2 approved]

von Everlyn Kamau ; Martin Mutunga ; Zaydah de Laurent ; et al.

Wellcome Open Research, Vol 6 (2021)

Schlagworte: metagenomics; sequencing; SISPA; RSV; centrifugal processing; Endoh primers; eng; Medicine; Science
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13
Pooled testing conserves SARS-CoV-2 laboratory resources and improves test turn-around time: experience on the Kenyan Coast [version 2; peer review: 3 approved]

von Charles N. Agoti ; Martin Mutunga ; Arnold W. Lambisia ; et al.

Wellcome Open Research, Vol 5 (2021)

Schlagworte: Medicine; Science
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14
Infection patterns of endemic human coronaviruses in rural households in coastal Kenya [version 1; peer review: 1 approved, 2 approved with reservations]

von Ivy K. Kombe ; Martin Mutunga ; Dickson Machira Nyaguthii ; et al.

Wellcome Open Research, Vol 6 (2021)

Schlagworte: Human coronavirus; OC43; NL63; 229E; Transmission; Households; eng; Medicine; Science
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15
Pooled testing conserves SARS-CoV-2 laboratory resources and improves test turn-around time: experience on the Kenyan Coast [version 1; peer review: 3 approved]

von Charles N. Agoti ; Martin Mutunga ; Arnold W. Lambisia ; et al.

Wellcome Open Research, Vol 5 (2020)

Schlagworte: Medicine; Science
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16
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17
Changes in the global hospitalisation burden of respiratory syncytial virus in young children during the COVID-19 pandemic: a systematic analysis

von Mrčela, Dina ; Milić, Petra ; Veljačić Visković, Daniela ; et al.

In The Lancet Infectious Diseases April 2024 24(4):361-374
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18
Absence of Association between Cord Specific Antibody Levels and Severe Respiratory Syncytial Virus (RSV) Disease in Early Infants: A Case Control Study from Coastal Kenya.

von Joyce Uchi Nyiro ; Charles Jumba Sande ; Martin Mutunga ; et al.

PLoS ONE, Vol 11, Iss 11, p e0166706 (2016)

Schlagworte: Medicine; Science
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19
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20
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21

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22
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23
Multispecies Cocirculation of Adenoviruses Identified by Next-Generation Sequencing During an Acute Gastroenteritis Outbreak in Coastal Kenya in 2023.

von Lambisia, Arnold W ; Mutunga, Martin ; Katama, Esther N ; et al.

Schlagworte: Kenya; ONT; RespiCoV; enteric; human adenovirus; Article
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24
Multi-species co-circulation of adenoviruses identified by next generation sequencing during an acute gastroenteritis outbreak in coastal Kenya in 2023

von Lambisia, Arnold W ; Mutunga, Martin ; Katama, Esther N ; et al.

Schlagworte: 32 Biomedical and Clinical Sciences; 3202 Clinical Sciences; Infectious Diseases; Pediatric; Biotechnology; Digestive Diseases; Genetics; 2.4 Surveillance and distribution; 3 Good Health and Well Being; Article
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25
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